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Closely related fungi employ diverse enzymatic strategies to degrade plant biomassThe Synthetic Potential of Fungal Feruloyl Esterases: A Correlation with Current Classification Systems and Predicted Structural PropertiesCultivation of Podospora anserina on soybean hulls results in an efficient enzyme cocktail for plant biomass hydrolysisIdentification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulatorCarbohydrate esterase family 16 contains fungal hemicellulose acetyl esterases (HAEs) with varying specificityExpression-based clustering of CAZyme-encoding genes of Aspergillus nigerRecombinant production and characterization of six novel GH27 and GH36 alpha-galactosidases from Penicillium subrubescens and their synergism with a commercial mannanase during the hydrolysis of lignocellulosic biomassIn Silico Analysis of Putative Sugar Transporter Genes in Aspergillus niger Using Phylogeny and Comparative TranscriptomicsDiscovery and Functional Analysis of a Salicylic Acid Hydroxylase from Aspergillus nigerConserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus PycnoporusGenomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales)The physiology of Agaricus bisporus in semi-commercial compost cultivation appears to be highly conserved among unrelated isolatesThe fungus Aspergillus niger consumes sugars in a sequential manner that is not mediated by the carbon catabolite repressor CreAGenomic and Postgenomic Diversity of Fungal Plant Biomass Degradation ApproachesGalR, GalX and AraR co-regulate d-galactose and l-arabinose utilization in Aspergillus nidulansFungal glycoside hydrolase family 44 xyloglucanases are restricted to the phylum Basidiomycota and show a distinct xyloglucan cleavage patternInvestigation of inter- and intraspecies variation through genome sequencing of Aspergillus section NigriA comparison between the homocyclic aromatic metabolic pathways from plant-derived compounds by bacteria and fungiDetailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory levelOccurrence and function of enzymes for lignocellulose degradation in commercial Agaricus bisporus cultivationComparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus AspergillusCRISPR/Cas9 facilitates rapid generation of constitutive forms of transcription factors in Aspergillus niger through specific on-site genomic mutations resulting in increased saccharification of plant biomassThe Cultivation Method Affects the Transcriptomic Response of Aspergillus niger to Growth on Sugar Beet PulpPenicillium subrubescens adapts its enzyme production to the composition of plant biomassCharacterization of a feruloyl esterase from Aspergillus terreus facilitates the division of fungal enzymes from Carbohydrate Esterase family 1 of the carbohydrate-active enzymes (CAZy) databaseThe presence of trace components significantly broadens the molecular response of Aspergillus niger to guar gumFunctional diversity in Dichomitus squalens monokaryonsInduction of Genes Encoding Plant Cell Wall-Degrading Carbohydrate-Active Enzymes by Lignocellulose-Derived Monosaccharides and Cellobiose in the White-Rot Fungus Dichomitus squalensA comparative genomics study of 23 Aspergillus species from section FlaviSelective Cleavage of Lignin beta-O-4 Aryl Ether Bond by beta-Etherase of the White-Rot Fungus Dichomitus squalensFungal feruloyl esterases: Functional validation of genome mining based enzyme discovery including uncharacterized subfamiliesGenomic and exoproteomic diversity in plant biomass degradation approaches among AspergilliDevelopments and opportunities in fungal strain engineering for the production of novel enzymes and enzyme cocktails for plant biomass degradationDiscovery of Novel p-Hydroxybenzoate-m-hydroxylase, Protocatechuate 3,4 Ring-Cleavage Dioxygenase, and Hydroxyquinol 1,2 Ring-Cleavage Dioxygenase from the Filamentous Fungus Aspergillus nigerDraft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifugaThe draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungiComparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermisporaBasidiomycete GenomicsFungal Ligninolytic Enzymes and Their ApplicationsEngineering of primary carbon metabolism in filamentous fungi
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Miia R. Makela