Effects of NI on amoA bacterial abundancesinterkingdom relationships in the soil and rhizosphereOrganic nitrogen rearranges both structure and activity of the soilborne microbial seedbankLONG-TERM APPLICATION OF LIME AND GYPSUM ON TROPICAL NO-TILLAGE SYSTEM CHANGES SOIL MICROBIAL COMMUNITIES AND NITROGEN-CYCLESoil microbial response to organic disturbancesSOIL MICROBIAL COMMUNITY RESISTANCE TO NPK FERTILIZATION AND RESILIANCE TO FERTILIZATION WITH DICYANDIAMIDE-TREATED SWINE SLURRYWood characteristics determine bacterial assemblyHere is the sequence that are generated from cross dilution design study. All samples were sequenced by 16S rRNA gene sequence.Herbaspirillum and Paraburkholderia genome sequencingThe effects of long-term experiment on fungal and protists community16S rRNA from sugarcane soil after different management practicesRhizomicrobiome structure of sorghum genotypes over plant growth stages in different soilsAcidobacterial EPS degraders uraveled by stable isotope probingSoil microbial response to organic disturbancessoil metagenomeSustainability of microalgae fertilization above and belowgroundRecovery of soil fungal structure over one year after multiple pulse disturbances with organic fertilizationResponses of Acidobacteria Granulicella sp. WH15 to carbon stress revealed by integrated omics analysesDifferential abundance affect fungal communities structure and composition in Amazonian Dark Earth and black carbon particlesRhizomicrobiome structure of sorghum genotypes over plant growth stages in different soilsAmmonia-oxidizing bacterial communities in tropical soils under N and organic amendmentDraft genomes of vinasse bacteriaMicrobiome of different forms of vinasse organic residueSoil microbial response to organic disturbances
contactPerson
Bacterial community composition and diversity of two different forms of an organic residue of bioenergy cropOrganic amendment strengthens interkingdom associations in the soil and rhizosphere of barley (Hordeum vulgare)Soil microbiome is more heterogeneous in organic than in conventional farming systemNitrification inhibitors effectively target N2O-producing Nitrosospira spp. in tropical soilEnvironmental filtering: A case of bacterial community assembly in soilRhizobacterial community structure differences among sorghum cultivars in different growth stages and soilsFrom toilet to agricultureImpact of different trace elements on the growth and proteome of two strains of Granulicella, class “Acidobacteriia”Forage grasses steer soil nitrogen processes, microbial populations, and microbiome composition in a long-term tropical agriculture systemResilience of the resident soil microbiome to organic and inorganic amendment disturbances and to temporary bacterial invasionSoil substrate source drives the microbes involved in the degradation of gelatin used as a biostimulantCarbon and Nutrients from Organic Residues Modulate the Dynamics of Prokaryotic and Fungal CommunitiesSorghum Growth Promotion by Paraburkholderia tropica and Herbaspirillum frisingense: Putative Mechanisms Revealed by Genomics and MetagenomicsCultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymerModulation of the soil microbiome by long-term Ca-based soil amendments boosts soil organic carbon and physicochemical quality in a tropical no-till crop rotation systemDynamics of active potential bacterial and fungal interactions in the assimilation of acidobacterial EPS in soilAmazonian Dark Earth and its Black Carbon Particles Harbor Different Fungal Abundance and DiversityGenome-resolved metagenomics of sugarcane vinasse bacteriaRearranging the sugarcane holobiont via plant growth-promoting bacteria and nitrogen inputOrganic nitrogen rearranges both structure and activity of the soil-borne microbial seedbankNitrosospira sp. govern nitrous oxide emissions in a tropical soil amended with residues of bioenergy cropLong-term farming systems modulate multi-trophic responsesMicrobial extracellular polymeric substances – ecological functions and impact on soil aggregationCo-variation of bacterial and fungal communities in different sorghum cultivars and growth stages is soil dependentDynamics and resilience of soil mycobiome under multiple organic and inorganic pulse disturbancesResponses of <i>Acidobacteria Granulicella</i> sp. WH15 to high carbon revealed by integrated omics analysesRecycling organic residues in agriculture impacts soil-borne microbial community structure, function and N2O emissions.Beneficial microbial species and metabolites alleviate soybean oxidative damage and increase grain yield during short dry spellsComparison of methane metabolism in the rhizomicrobiomes of wild and related cultivated rice accessions reveals a strong impact of crop domesticationLong term co-application of lime and phosphogypsum increases 15 N recovery and reduces 15 N losses by modulating soil nutrient availability, crop growth and N cycle genesFeasibility of early fertilization of maize with 15N application to preceding cover cropDominance of bacterial ammonium oxidizers and fungal denitrifiers in the complex nitrogen cycle pathways related to nitrous oxide emissionA review on the impact of domestication of the rhizosphere of grain crops and a perspective on the potential role of the rhizosphere microbial community for sustainable rice crop productionNative bacteria promote plant growth under drought stress condition without impacting the rhizomicrobiomeFacilitation in the soil microbiome does not necessarily lead to niche expansionUnraveling the impact of protein hydrolysates on rhizosphere microbial communitiesCurrent Challenges and Pitfalls in Soil MetagenomicsNitrogen input on organic amendments alters the pattern of soil–microbe-plant co-dependenceSelf-crossing leads to weak co-variation of the bacterial and fungal communities in the rice rhizosphereCultivar governs plant response to inoculation with single isolates and the microbiome associated with arbuscular mycorrhizal fungi
correspondingAuthor
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Bacterial community succession in pine-wood decompositionContext dependency and saturating effects of loss of rare soil microbes on plant productivityExploring soil microbial 16S rRNA sequence data to increase carbon yield and nitrogen efficiency of a bioenergy cropSoil microbiome responses to the short-term effects of Amazonian deforestationFungal community assembly in the Amazonian Dark EarthTemporal variability of soil microbial communities after application of dicyandiamide-treated swine slurry and mineral fertilizersSuccessive DNA extractions improve characterization of soil microbial communitiesTaxonomical and functional microbial community selection in soybean rhizosphereMethanogens predominate in natural corrosion protective layers on metal sheet piles.Land-use system shapes soil bacterial communities in Southeastern Amazon regionWood Decay Characteristics and Interspecific Interactions Control Bacterial Community Succession in Populus grandidentata (Bigtooth Aspen)Enhancing phosphate-solubilising microbial communities through artificial selectionToward more sustainable tropical agriculture with cover cropsMicrobiome resilience of Amazonian forests:Acidobacteria strains from subdivision 1 act as plant growth-promoting bacteriaAmazonian Dark Earth and plant species from the Amazon region contribute to shape rhizosphere bacterial communitiesNitrous oxide emission related to ammonia-oxidizing bacteria and mitigation options from N fertilization in a tropical soilImpact of land-use changes in the Amazon on bacterial diversity, composition and distributionAcidobacteriaNon-random species loss in bacterial communities reduces antifungal volatile productionEucalypt species drive rhizosphere bacterial and fungal community assembly but soil phosphorus availability rearranges the microbiomePlant and soil fungal but not soil bacterial communities are linked in long-term fertilized grassland.Lettuce and rhizosphere microbiome responses to growth promoting Pseudomonas species under field conditionsFunctional traits dominate the diversity-related selection of bacterial communities in the rhizosphereComposition, function and succession of bacterial communities in the tomato rhizosphere during continuous croppingAmmonia-oxidizing bacteria and fungal denitrifier diversity are associated with N<sub>2</sub>O production in tropical soilsConventional & organic soil management as divergent drivers of resident and active fractions of major soil food web constituentsSoil-borne microbiome: linking diversity to functionThe ecology of Acidobacteria: moving beyond genes and genomesThe reach of the genome signature in prokaryotesThe influence of agar brands and micronutrients in the growth optimization of Granulicella sp. (Acidobacteriota)rDNA-based characterization of a new binucleate Rhizoctonia spp. causing root rot on kale in BrazilFungal Community Succession of Populus grandidentata (Bigtooth Aspen) during Wood DecompositionTracking fungal community responses to maize plants by DNA- and RNA-based pyrosequencingComparative Genomics of Two Leptospira interrogans Serovars Reveals Novel Insights into Physiology and Pathogenesis.Morphomolecular characterization of Pleurotus ostreatus (Jacq. Fr.) kummer strains in relation to luminosity and temperature of frutificationMicrobial functional diversity in vineyard soils: sulfur metabolism and links with grapevine plants and wine qualityEvaluation of Monocot and Eudicot Divergence Using the Sugarcane TranscriptomeFusarium: more than a node or a foot-shaped basal cell<i>Fusarium</i> diversity associated with the <i>Sorghum</i>-<i>Striga</i> interaction in Ethiopia
author
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E.E. Kuramae
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0000-0001-6701-8668
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Public - No restriction
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Publiek - Geen beperking
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Prof. dr. ir.
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