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Comparative genomics of biotechnologically important yeastsComparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in FungiDichomitus squalens partially tailors its molecular responses to the composition of solid woodDraft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulatorThe Amylolytic Regulator AmyR of
Aspergillus niger Is Involved in Sucrose and Inulin Utilization in a Culture-Condition-Dependent Manner.Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus nigerConserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus PycnoporusGenomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales)Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion.GalR, GalX and AraR co-regulate d-galactose and l-arabinose utilization in Aspergillus nidulansInvestigation of inter- and intraspecies variation through genome sequencing of Aspergillus section NigriThe Sugar Metabolic Model of
Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum.Expansion of Signal Transduction Pathways in Fungi by Extensive Genome DuplicationMixtures of aromatic compounds induce ligninolytic gene expression in the wood-rotting fungus Dichomitus squalensThe Architecture of Metabolism Maximizes Biosynthetic Diversity in the Largest Class of FungiDetailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory levelGenomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradationGlucose-Mediated Repression of Plant Biomass Utilization in the White-Rot Fungus Dichomitus squalensLatent homology and convergent regulatory evolution underlies the repeated emergence of yeastsDeletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomassThe transcriptional activator ClrB is crucial for the degradation of soybean hulls and guar gum in Aspergillus nigerThe obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein dietCreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent mannerComparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus AspergillusTranscriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory networkThe gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungiEnemy or ally: a genomic approach to elucidate the lifestyle of Phyllosticta citrichinaensisRevisiting a 'simple' fungal metabolic pathway reveals redundancy, complexity and diversityA comparative genomics study of 23 Aspergillus species from section FlaviGenome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungiMycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina FungiIntroductionCorrectionLarge-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogensFungal GenomicsGenomic and exoproteomic diversity in plant biomass degradation approaches among AspergilliDraft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifugaThe draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Igor V Grigoriev