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The pluripotent genome in three dimensions is shaped around pluripotency factorsGenome-wide analysis of FOXO3 mediated transcription regulation through RNA polymerase II profilingLimitations and possibilities of small RNA digital gene expression profilingVariegated gene expression caused by cell-specific long-range DNA interactionsRepertoire and evolution of miRNA genes in four divergent nematode species.Complete knockout of the nociceptin/orphanin FQ receptor in the rat does not induce compensatory changes in mu, delta and kappa opioid receptors.eRNAs are required for p53-dependent enhancer activity and gene transcriptionSmall RNA expression and strain specificity in the ratDNA methylation dynamics during intestinal stem cell differentiation reveals enhancers driving gene expression in the villus4C technology: protocols and data analysisRobust 4C-seq data analysis to screen for regulatory DNA interactionsDetermining long-range chromatin interactions for selected genomic sites using 4C-seq technology: From fixation to computationThe inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNAA decade of 3C technologies: insights into nuclear organization